Final library sequencing

Do you have a ready-to-sequence library but no NGS device available?
We are offering sequencing services for customer-prepared libraries. Our platforms provide a wide range of sequencing depths and throughput options, supporting both large-scale projects requiring full flow cell utilization and smaller projects requiring only a few thousand reads.
Detailed specifications and flow cell capacities for our sequencing platforms are provided below.
NGS_CF_Logo_Urheber_NGS_Core_Facility
© NGS Core Facility

Illumina MiSeq is the ideal choice for small-scale projects, targeted sequencing, and amplicon sequencing.

  • Max Read Lengths: 2x 300bp
  • Data Output:
    • 1M-25M reads per run
    • up to 15Gb per run
    • one cartridge per run
  • Single-end and paired-end sequencing
  • Compatible with MiSeq v2 and MiSeq v3 Reagent Kits

The Aviti LT offers flexible run options, making it ideal for small- to medium-scale sequencing projects, including targeted panels, RNA sequencing, and whole-genome studies where moderate throughput and high data quality are required.

  • Max Read Lengths: 2x 300bp
  • Data Output:
    • 100M-500M reads per flow cell
    • up to 150Gb per flow cell
    • two flow cells per run
  • Single-end and paired-end sequencing
  • Compatible with Aviti Low Output and Medium Output Kits
  • Price per Gb: from 8,50€ (Aviti Cloud Break 2x150 Medium Out)

The NovaSeq 6000 is an ideal platform for large-scale, high-throughput sequencing applications, including whole-genome, exome, transcriptome, and single-cell projects.

  • Max Read Lengths: 2x 250 bp
  • Data Output:
    • 650M - 10B reads per flow cell
    • up to 3 Tb per flow cell
    • up to two flow cells per run
  • Single-end and paired-end sequencing
  • Compatible with a wide range of applications
  • Mix and match flow cell types
  • Price per Gb: from 7,50€ (S4 300)

For projects requiring even higher throughput, faster turnaround times, and greater cost-efficiency, the NovaSeq X Plus offers the latest sequencing technology with up to 16 Tb per run, making it particularly suited for population-scale studies and advanced multiomics applications.

  • Max Read Lengths: 2x 300 bp
  • Data Output:
    • 1.5B - 25B reads per flow cell
    • up to 8 Tb per flow cell
    • up to two flow cells per run
  • Single-end and paired-end sequencing
  • Compatible with a wide range of applications
  • Mix and match flow cell types
  • Price per Gb: from 2,50€ (25B 300)

Is designed for long-read sequencing applications, enabling detailed analysis of complex genomes, structural variations, and simultaneous detection of genetic and epigenetic variation.

  • Read Lengths: from short (20bp) to ultra-long (up to 4 Mb)
  • Max Data Output per flow cell:
    • 100-200 Gb native gDNA reads (read N50 ~25 kb) 
    • >100 million cDNA reads for isoform-level analysis
    • 50-100 Gb ultra-long native DNA reads (read N50 >50 kb)
    • >200 Gb on metagenomic samples (read N50 ~ 10 kb)
  • Up to 24 flow cells per run

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